{
  "_id": "6a2bbced578398594319b84f",
  "Package": "cifti",
  "Type": "Package",
  "Title": "Toolbox for Connectivity Informatics Technology Initiative\n('CIFTI') Files",
  "Version": "0.5.0",
  "Authors@R": "person(given = \"John\", family = \"Muschelli\", \nrole = c(\"aut\", \"cre\"), email = \"muschellij2@gmail.com\")",
  "Description": "Functions for the input/output and visualization of\nmedical imaging data in the form of 'CIFTI' files\n<https://www.nitrc.org/projects/cifti/>.",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.3",
  "VignetteBuilder": "knitr",
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  "Repository": "https://muschellij2.r-universe.dev",
  "Date/Publication": "2026-01-13 18:59:07 UTC",
  "RemoteUrl": "https://github.com/muschellij2/cifti",
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  "_assets": [
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    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
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    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
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  "_realowner": "muschellij2",
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      "date": "2017-05-05"
    },
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      "date": "2018-02-01"
    },
    {
      "version": "0.5.0",
      "date": "2026-01-13"
    }
  ],
  "_exports": [
    "cifti_as_list",
    "cifti_brain_structs",
    "cifti_coords_gifti",
    "cifti_data",
    "cifti_read_char",
    "cifti_xml",
    "cifti_xml_txt",
    "download_cifti_data",
    "get_brain_model",
    "get_cifti_type",
    "get_named_map",
    "get_parcel",
    "get_surface",
    "get_volume",
    "have_cifti_test_data",
    "is_cifti_numeric",
    "is.cifti",
    "matrix_ind_map_nodes",
    "nifti_2_hdr",
    "parse_brain_model",
    "parse_named_map",
    "parse_parcel",
    "parse_surface",
    "parse_volume",
    "read_cifti",
    "readCIFTI",
    "readcii"
  ],
  "_help": [
    {
      "page": "cifti_brain_structs",
      "title": "Extract Brain Structures from CIFTI Brain Models",
      "topics": [
        "cifti_brain_structs"
      ]
    },
    {
      "page": "cifti_coords_gifti",
      "title": "Map CIfTI values to Coordinates using GIfTI",
      "topics": [
        "cifti_coords_gifti"
      ]
    },
    {
      "page": "cifti_data",
      "title": "Extract CIFTI data from file",
      "topics": [
        "cifti_data"
      ]
    },
    {
      "page": "cifti_read_char",
      "title": "Read characters with embedded nulls",
      "topics": [
        "cifti_read_char"
      ]
    },
    {
      "page": "cifti_xml_txt",
      "title": "Extract CIFTI XML",
      "topics": [
        "cifti_xml",
        "cifti_xml_txt"
      ]
    },
    {
      "page": "download_cifti_data",
      "title": "Download CIFTI Test Data",
      "topics": [
        "download_cifti_data"
      ]
    },
    {
      "page": "get_cifti_type",
      "title": "Get Generic CIFTI Type",
      "topics": [
        "cifti_as_list",
        "get_cifti_type"
      ]
    },
    {
      "page": "have_cifti_test_data",
      "title": "Check Presence of CIFTI Test Data",
      "topics": [
        "have_cifti_test_data"
      ]
    },
    {
      "page": "is_cifti_numeric",
      "title": "Test of numeric CIFTI field",
      "topics": [
        "is_cifti_numeric"
      ]
    },
    {
      "page": "is.cifti",
      "title": "Test if CIFTI",
      "topics": [
        "is.cifti"
      ]
    },
    {
      "page": "matrix_ind_map_nodes",
      "title": "Extract MatrixIndicesMap nodes from CIFTI",
      "topics": [
        "matrix_ind_map_nodes"
      ]
    },
    {
      "page": "nifti_2_hdr",
      "title": "Read NIfTI-2 Header",
      "topics": [
        "nifti_2_hdr"
      ]
    },
    {
      "page": "parse_brain_model",
      "title": "Parse BrainModel from CIFTI",
      "topics": [
        "get_brain_model",
        "parse_brain_model"
      ]
    },
    {
      "page": "parse_named_map",
      "title": "Parse Named Map from CIFTI",
      "topics": [
        "get_named_map",
        "parse_named_map"
      ]
    },
    {
      "page": "parse_parcel",
      "title": "Parse Parcel from CIFTI",
      "topics": [
        "get_parcel",
        "parse_parcel"
      ]
    },
    {
      "page": "parse_surface",
      "title": "Parse Surface from CIFTI",
      "topics": [
        "get_surface",
        "parse_surface"
      ]
    },
    {
      "page": "parse_volume",
      "title": "Parse Volume from CIFTI",
      "topics": [
        "get_volume",
        "parse_volume"
      ]
    },
    {
      "page": "read_cifti",
      "title": "Read CIFTI File",
      "topics": [
        "readCIFTI",
        "readcii",
        "read_cifti"
      ]
    }
  ],
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  "_rundeps": [
    "abind",
    "base64enc",
    "bitops",
    "cli",
    "gifti",
    "oro.nifti",
    "R.methodsS3",
    "R.oo",
    "R.utils",
    "Rcpp",
    "rlang",
    "RNifti",
    "xml2"
  ],
  "_vignettes": [
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      "source": "test_dims_MSC.Rmd",
      "filename": "test_dims_MSC.html",
      "title": "Testing the Dimensions with CIFTI Files",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Load MSC data and test data from cifti package",
        "For reference: MSC 01 (65890 * 818) (using matlab ft_read_cifti), showing first 5 rows & columns",
        "MSC Sub-01 Session 1 (sub-MSC01_ses-func01_task-rest_bold_32k_fsLR.dtseries.nii)",
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        "Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii",
        "Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii",
        "Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii",
        "Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii (dense label on vertex level)"
      ],
      "created": "2019-02-10 20:22:46",
      "modified": "2026-01-13 18:59:07",
      "commits": 5
    },
    {
      "source": "cifti_work.Rmd",
      "filename": "cifti_work.html",
      "title": "Working with CIFTI Files",
      "author": "John Muschelli",
      "engine": "knitr::rmarkdown",
      "headings": [],
      "created": "2017-10-08 19:34:04",
      "modified": "2026-01-13 03:41:23",
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  "_nocasepkg": "cifti",
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