{
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"Package": "cifti",
"Type": "Package",
"Title": "Toolbox for Connectivity Informatics Technology Initiative\n('CIFTI') Files",
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"Authors@R": "person(given = \"John\", family = \"Muschelli\", \nrole = c(\"aut\", \"cre\"), email = \"muschellij2@gmail.com\")",
"Description": "Functions for the input/output and visualization of\nmedical imaging data in the form of 'CIFTI' files\n.",
"License": "GPL-2",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.3",
"VignetteBuilder": "knitr",
"Config/pak/sysreqs": "libxml2-dev",
"Repository": "https://muschellij2.r-universe.dev",
"Date/Publication": "2026-01-13 18:59:07 UTC",
"RemoteUrl": "https://github.com/muschellij2/cifti",
"RemoteRef": "HEAD",
"RemoteSha": "c7847782eb6f48f8dec79e7f7b8245eff9cc07d2",
"NeedsCompilation": "no",
"Packaged": {
"Date": "2026-05-13 08:28:15 UTC",
"User": "root"
},
"Author": "John Muschelli [aut, cre]",
"Maintainer": "John Muschelli ",
"MD5sum": "5a86e9a806e517d4e24e8dbe635e68fe",
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"_assets": [
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"extra/readme.md",
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],
"_homeurl": "https://github.com/muschellij2/cifti",
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],
"_exports": [
"cifti_as_list",
"cifti_brain_structs",
"cifti_coords_gifti",
"cifti_data",
"cifti_read_char",
"cifti_xml",
"cifti_xml_txt",
"download_cifti_data",
"get_brain_model",
"get_cifti_type",
"get_named_map",
"get_parcel",
"get_surface",
"get_volume",
"have_cifti_test_data",
"is_cifti_numeric",
"is.cifti",
"matrix_ind_map_nodes",
"nifti_2_hdr",
"parse_brain_model",
"parse_named_map",
"parse_parcel",
"parse_surface",
"parse_volume",
"read_cifti",
"readCIFTI",
"readcii"
],
"_help": [
{
"page": "cifti_brain_structs",
"title": "Extract Brain Structures from CIFTI Brain Models",
"topics": [
"cifti_brain_structs"
]
},
{
"page": "cifti_coords_gifti",
"title": "Map CIfTI values to Coordinates using GIfTI",
"topics": [
"cifti_coords_gifti"
]
},
{
"page": "cifti_data",
"title": "Extract CIFTI data from file",
"topics": [
"cifti_data"
]
},
{
"page": "cifti_read_char",
"title": "Read characters with embedded nulls",
"topics": [
"cifti_read_char"
]
},
{
"page": "cifti_xml_txt",
"title": "Extract CIFTI XML",
"topics": [
"cifti_xml",
"cifti_xml_txt"
]
},
{
"page": "download_cifti_data",
"title": "Download CIFTI Test Data",
"topics": [
"download_cifti_data"
]
},
{
"page": "get_cifti_type",
"title": "Get Generic CIFTI Type",
"topics": [
"cifti_as_list",
"get_cifti_type"
]
},
{
"page": "have_cifti_test_data",
"title": "Check Presence of CIFTI Test Data",
"topics": [
"have_cifti_test_data"
]
},
{
"page": "is_cifti_numeric",
"title": "Test of numeric CIFTI field",
"topics": [
"is_cifti_numeric"
]
},
{
"page": "is.cifti",
"title": "Test if CIFTI",
"topics": [
"is.cifti"
]
},
{
"page": "matrix_ind_map_nodes",
"title": "Extract MatrixIndicesMap nodes from CIFTI",
"topics": [
"matrix_ind_map_nodes"
]
},
{
"page": "nifti_2_hdr",
"title": "Read NIfTI-2 Header",
"topics": [
"nifti_2_hdr"
]
},
{
"page": "parse_brain_model",
"title": "Parse BrainModel from CIFTI",
"topics": [
"get_brain_model",
"parse_brain_model"
]
},
{
"page": "parse_named_map",
"title": "Parse Named Map from CIFTI",
"topics": [
"get_named_map",
"parse_named_map"
]
},
{
"page": "parse_parcel",
"title": "Parse Parcel from CIFTI",
"topics": [
"get_parcel",
"parse_parcel"
]
},
{
"page": "parse_surface",
"title": "Parse Surface from CIFTI",
"topics": [
"get_surface",
"parse_surface"
]
},
{
"page": "parse_volume",
"title": "Parse Volume from CIFTI",
"topics": [
"get_volume",
"parse_volume"
]
},
{
"page": "read_cifti",
"title": "Read CIFTI File",
"topics": [
"readCIFTI",
"readcii",
"read_cifti"
]
}
],
"_readme": "https://github.com/muschellij2/cifti/raw/HEAD/README.md",
"_rundeps": [
"abind",
"base64enc",
"bitops",
"cli",
"gifti",
"oro.nifti",
"R.methodsS3",
"R.oo",
"R.utils",
"Rcpp",
"rlang",
"RNifti",
"xml2"
],
"_vignettes": [
{
"source": "test_dims_MSC.Rmd",
"filename": "test_dims_MSC.html",
"title": "Testing the Dimensions with CIFTI Files",
"engine": "knitr::rmarkdown",
"headings": [
"Load MSC data and test data from cifti package",
"For reference: MSC 01 (65890 * 818) (using matlab ft_read_cifti), showing first 5 rows & columns",
"MSC Sub-01 Session 1 (sub-MSC01_ses-func01_task-rest_bold_32k_fsLR.dtseries.nii)",
"Data where dimensions are row x dense loads fine. Updated function loads them the same way as before.",
"Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii",
"Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii",
"Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii",
"Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii (dense label on vertex level)"
],
"created": "2019-02-10 20:22:46",
"modified": "2026-01-13 18:59:07",
"commits": 5
},
{
"source": "cifti_work.Rmd",
"filename": "cifti_work.html",
"title": "Working with CIFTI Files",
"author": "John Muschelli",
"engine": "knitr::rmarkdown",
"headings": [],
"created": "2017-10-08 19:34:04",
"modified": "2026-01-13 03:41:23",
"commits": 4
}
],
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"_indexed": true,
"_nocasepkg": "cifti",
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