{ "_id": "6a105cdbacfb0bcc41ca45a1", "Type": "Package", "Package": "freesurfer", "Title": "Wrapper Functions for 'FreeSurfer'", "Version": "1.8.1.902", "Authors@R": "c(\nperson(\"John\", \"Muschelli\", , \"muschellij2@gmail.com\", role = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(ORCID = \"0000-0001-6469-1750\")),\nperson(\"Athanasia Mo\", \"Mowinckel\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-5756-0223\"))\n)", "Description": "Wrapper functions that interface with 'Freesurfer'\n, a powerful and\ncommonly-used 'neuroimaging' software, using system commands.\nThe goal is to be able to interface with 'Freesurfer'\ncompletely in R, where you pass R objects of class 'nifti',\nimplemented by package 'oro.nifti', and the function executes\nan 'Freesurfer' command and returns an R object of class\n'nifti' or necessary output.", "License": "GPL-3", "URL": "https://muschellij2.github.io/freesurfer/,\nhttps://github.com/muschellij2/freesurfer", "BugReports": 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getting FreeSurfer help", "topics": [ "fs_help" ] }, { "page": "fs_imgext", "title": "Determine extension of image based on Freesurfer output type", "topics": [ "fs_imgext" ] }, { "page": "fs_lut", "title": "Freesurfer look up table (LUT)", "topics": [ "fs_lut" ] }, { "page": "fs_sitrep", "title": "FreeSurfer Situation Report", "topics": [ "fs_sitrep" ] }, { "page": "fs_version", "title": "Find Freesurfer Version", "topics": [ "fs_version" ] }, { "page": "get_fs", "title": "Generate FreeSurfer Command Line Environment Setup", "topics": [ "get_fs" ] }, { "page": "get_fs_setting", "title": "Retrieve FreeSurfer Configuration Settings", "topics": [ "get_fs_home", "get_fs_license", "get_fs_output", "get_fs_setting", "get_fs_source", "get_fs_subdir", "get_fs_verbosity", "get_mni_bin" ] }, { "page": "have_fs", "title": "Logical check if Freesurfer is accessible", "topics": [ "have_fs" ] }, { "page": "mnc2nii", "title": "Convert MNC to NIfTI", "topics": [ "mnc2nii", "mnc2nii.help" ] }, { 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