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Mean", "topics": [ "fslmean" ] }, { "page": "fslmerge.help", "title": "FSLMerge help", "topics": [ "fslmerge.help" ] }, { "page": "fslmul.help", "title": "fslmul Help", "topics": [ "fslmul.help" ] }, { "page": "fslnan.help", "title": "fslnan Help", "topics": [ "fslnan.help" ] }, { "page": "fslnanm.help", "title": "fslnanm Help", "topics": [ "fslnanm.help" ] }, { "page": "fslor", "title": "Perform OR/Union operation on Images using FSL", "topics": [ "fslor", "fsl_or" ] }, { "page": "fslorient", "title": "FSL Orient", "topics": [ "fslorient" ] }, { "page": "fslorient.help", "title": "fslorient help", "topics": [ "fslorient.help" ] }, { "page": "fslorienter", "title": "Wrapper for FSL Get Orientation", "topics": [ "fslorienter" ] }, { "page": "fslrand.help", "title": "fslrand Help", "topics": [ "fslrand.help" ] }, { "page": "fslrandn.help", "title": "fslrandn Help", "topics": [ "fslrandn.help" ] }, { "page": "fslrange", "title": "Get range of an image", "topics": [ "fslrange" ] }, { "page": "fslrecip.help", "title": "fslrecip Help", "topics": [ "fslrecip.help" ] }, { "page": "fslrem.help", "title": "fslrem Help", "topics": [ "fslrem.help" ] }, { "page": "fslreorient2std", "title": "FSL Orient to MNI", "topics": [ "fslreorient2std", "fslreorient2std_mat" ] }, { "page": "fslreorient2std.help", "title": "fslreorient2std help", "topics": [ "fslreorient2std.help" ] }, { "page": "fslrobustfov", "title": "FSL Robust Field of View", "topics": [ "fslrobustfov", "fsl_robustfov" ] }, { "page": "fslrobustfov.help", "title": "FSL Robust Field of View Help", "topics": [ "fslrobustfov.help" ] }, { "page": "fslroi", "title": "FSL ROI", "topics": [ "fslroi", "fslroi_time", "fsl_roi" ] }, { "page": "fslsd", "title": "Image Standard Deviation", "topics": [ "fslsd" ] }, { "page": "fslsin", "title": "Sine Transform Image using FSL", "topics": [ "fslsin" ] }, { "page": "fslsin.help", "title": "fslsin Help", "topics": [ "fslsin.help" ] }, { "page": "fslslicetimer", "title": "FSL Slice 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"page": "get_quickshear_mask", "title": "Face Removal Mask using \"Quickshear Defacing for Neuroimages\" (Schimke et al. 2011)", "topics": [ "get_quickshear_mask", "quickshear_deface_image" ] }, { "page": "get.fsl", "title": "Create command declaring FSLDIR", "topics": [ "get.fsl", "get_fsl" ] }, { "page": "get.fsloutput", "title": "Determine FSL output type", "topics": [ "get.fsloutput" ] }, { "page": "get.imgext", "title": "Determine extension of image based on FSLOUTPUTTYPE", "topics": [ "get.imgext" ] }, { "page": "getForms", "title": "Get Q and S Forms of orientation matrix", "topics": [ "getForms" ] }, { "page": "have.fsl", "title": "Logical check if FSL is accessible", "topics": [ "have.fsl", "have_fsl" ] }, { "page": "intent_code-methods", "title": "Extract Image intent_code attribute", "topics": [ "intent_code,character-method", "intent_code-methods" ] }, { "page": "intent_name-methods", "title": "Extract Image intent_name attribute", "topics": [ "intent_name,character-method", "intent_name-methods" ] }, { "page": "intent_p1-methods", "title": "Extract Image intent_p1 attribute", "topics": [ "intent_p1,character-method", "intent_p1-methods" ] }, { "page": "intent_p2-methods", "title": "Extract Image intent_p2 attribute", "topics": [ "intent_p2,character-method", "intent_p2-methods" ] }, { "page": "intent_p3-methods", "title": "Extract Image intent_p3 attribute", "topics": [ "intent_p3,character-method", "intent_p3-methods" ] }, { "page": "invert_xfm", "title": "Convert a Transformation", "topics": [ "concat_xfm", "fixscaleskew_xfm", "invert_xfm" ] }, { "page": "magic-methods", "title": "Extract Image magic attribute", "topics": [ "magic,character-method", "magic-methods" ] }, { "page": "mcflirt", "title": "FSL Motion Correction", "topics": [ "mcflirt" ] }, { "page": "mcflirt.help", "title": "MCFLIRT help", "topics": [ "mcflirt.help" ] }, { "page": "melodic", "title": "Run MELODIC ICA", "topics": [ "melodic" ] }, { "page": 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